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A cross-study gene set enrichment analysis identifies critical pathways in endometriosis

Hongbo Zhao1,2, Qishan Wang1,2, Chunyan Bai1,2, Kan He1,2 and Yuchun Pan1,2*

1 School of Agriculture and Biology, Shanghai Jiao Tong University, Shanghai, PR China

2 Shanghai Key Lab for Veterinary Biotechnology, Shanghai, 200240, PR China

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Reproductive Biology and Endocrinology 2009, 7:94 doi:10.1186/1477-7827-7-94

Published: 8 September 2009

Additional files

Additional file 1:

Table 5: Pathway analysis of ovarian endometriosis data sets. The data provided represent the list of significant pathways identified by GSEA in the 3 ovarian endometriosis data sets.

Format: XLS Size: 111KB Download file

This file can be viewed with: Microsoft Excel Viewer

Open Data

Additional file 2:

Table 6: Pathway analysis of peritoneal endometriosis data sets. The data provided represent the list of significant pathways identified by GSEA in the 2 peritoneal endometriosis data sets.

Format: XLS Size: 61KB Download file

This file can be viewed with: Microsoft Excel Viewer

Open Data

Additional file 3:

Table 7: Pathway analysis between the timing of the uterine cycle. The data provided represent the list of significant pathways identified by GSEA between the timing of the uterine cycle.

Format: XLS Size: 33KB Download file

This file can be viewed with: Microsoft Excel Viewer

Open Data

Additional file 4:

Table 8: Pathway analysis in the specific phenotype of HEECs from endometriosis. The data provided represent the list of significant pathways identified by GSEA involved in the specific phenotype of HEECs from endometriosis.

Format: XLS Size: 35KB Download file

This file can be viewed with: Microsoft Excel Viewer

Open Data

Additional file 5:

Table 9: Common significant pathways in ovarian endometriosis data sets. The data provided represent the list of common significant pathways from GSEA of the 3 ovarian endometriosis datasets.

Format: XLS Size: 29KB Download file

This file can be viewed with: Microsoft Excel Viewer

Open Data

Additional file 6:

Table 10: Common significant pathways in peritoneal endometriosis data sets. The data provided represent the list of common significant pathways from GSEA of the 2 peritoneal endometriosis datasets.

Format: XLS Size: 23KB Download file

This file can be viewed with: Microsoft Excel Viewer

Open Data