Table 2

Identification of cDNA clones. The table gives the identification of the cDNA clones using blast analysis against EMBL/NCBI database. The clones were ranked by HUGO symbol (Human Genome Organisation). H1-clones correspond to forward hybridization (FSH-induced genes) and H2-clones to reverse hybridization (FSH-repressed genes).
Clone			Matching Sequences

clone	EMBL accession number	insert size (bp)	identification	species	Similarity		accession number	HUGO symbol

					%	bp
H2-146	AJ704910	255	actin, alpha 2, smooth muscle, aorta	HS	96	211	MN_001613	ACTA2
H2-96	AJ704907	111	actin, gamma 1	HS	89	119	NM_001614	ACTG1
H1-2	AJ704867	186	cytosolic dihydrodiol dehydrogenase 3	BT	90	115	D49542	AKR1C3
H2-222	AJ704918	643	annexin A5	HS	93	495	CR541842	ANXA5
H1-378	AJ704899	76	ADP-ribosylation factor 1	HS	91	74	AF493881	ARF1
H1-98	AJ704876	166	mitochondrial ATPase 6	SS	98	165	AF250315	ATP6
H1-138	AJ704880	354	calpain I light subunit	SS	99	353	M11778	CAPNS1
H1-357	AJ704896	107	Cctg for chaperonin	HS	96	104	X74801	CCT3
H1-124	AJ704878	177	Pig complement cytolysis inhibitor	SS	99	171	M84639	clu
H1-61	AJ704870	245	alpha collagene human type IV(alport syndrome)	SS	82	162	M31115	col4A5
H2-108	AJ704909	410	cytochrome c oxidase II	SS	99	410	U18827	COXII
H1-253	AJ704887	99	chondroitin sulfate proteoglycan 6	HS	89	88	BC047324	CSPG6
H1-280	AJ704890	251	cytochrome P-450 (SCC)	SS	99	249	X13768	CYP11A1
H1-365	AJ704898	110	7-dehydrocholesterol reductase (DHCR7)	HS	95	111	AF062481	DHCR7
H1-140	AJ704881	143	farnesyl diphosphate synthase	BT	89	75	AF461050	FDPS
H1-185	AJ783757	366	glutathione peroxidase 3 (plasma) (GPX3)	HS	87	354	NM_002084	GPX3
H2-200	AJ704914	179	glycogenin	HS	83	179	NM_004130	GYG
H2-105	AJ704908	228	Homo sapiens heterochromatin protein 1, binding protein 3	HS	92	219	BC045660	HP1BP3
H1-1	AJ704866	256	3 β hydroxysteroidogenase	SS	99	256	AF232699	HSD3B1
H2-265	AJ704919	299	inositol polyphosphate-1-phosphatase	HS	89	229	NM_002194	INPP1
H2-175	AJ704912	187	matrin 3	HS	88	186	NM_018834	MATR3
H1-100	AJ704877	237	NAC alpha	HS	92	237	AY034001	NACA
H1-242	AJ704885	481	complete mitochondrial DNA	SS	100	450	AJ002189	NADH1
H2-201	AJ785755	170	Sus scrofa breed Landrace mitochondrion	SS	100	170	AF304202	NADH5
H1-33	AJ704869	141	peroxiredoxin 2	BT	86	117	AF305562	PDX2
H1-266	AJ704888	135	non-selenium glutathione phospholipid hydroperoxide peroxidase (phgpx gene)	SS	100	135	AJ243849	phgpx
H2-29	AJ704900	123	proteasome (prosome, macropain) 26S subunit, ATPase	HS	86	123	NM_002806	PSMC6
H1-358	AJ704897	87	cDNA DKFZp686F06244	HS	97	87	HSM806676	Q8NEW0
H1-73	AJ704872	120	ribosomal protein S15A	HS	93	130	BC001697	RPS15A
H1-129	AJ704879	467	Sterol regulatory element binding protein cleavage-activating protein (SCAP)	SS	88	486	AY705447	SCAP
H1-90	AJ704873	199	high density lipoprotein receptor SR-BI mRNA	SS	99	199	AF467889	SCARB1
H1-96	AJ704875	404	splicing factor 3a, subunit 3	HS	93	401	NM_006802	SF3A3
H1-62	AJ704871	90	solute carrier family 25	HS	85	98	BC008737	SLC25A6
H2-44	AJ704902	529	thrombospondin 1	BT	90	527	AB005287	THBS1
H1-94	AJ704874	114	tenascin	HS	91	114	D49542.1	TNC
H2-72	AJ704904	133	ubiquitin associated protein 2 (UBAP2), transcript variant 1	HS	91	106	NM_018449.2	UBAP2
H1-202	AJ704883	178	ubiquitin-conjugating enzyme E2E 2	HS	98	178	BC022332	UBE2E2
H1-305	AJ704893	178	angiogenic factor VG5Q,	HS	85	169	BC032844	VG5Q
H2-37	AJ704901	451	vimentin	HS	92	438	NM_003380	VIM
H2-170	AJ704911	191	breed Landrace mitochondrion	SS	100	190	AF304202	unknown
H2-202	AJ704915	120	domestica mitochondrial D-loop,	SS	100	120	AF276937	unknown
H1-180	AJ704882	178	885998 MARC 4PIG	SS	99	178	CF792994	unknown
H1-246	AJ704886	284	jns82_C06.f jns 5'	SS	99	284	CB481752	unknown
H1-276	AJ704889	247	MI-P-CP0-nvm-c-03-0-UI.s2 MI-P-CP0	SS	99	236	BQ603741	unknown
H1-294	AJ704891	131	855499 MARC 4PIG 5'	SS	98	118	CF787582	unknown
H1-345	AJ704895	90	820907 MARC 3PIG 3'	SS	10	89	CF359642	unknown
H2-92	AJ704905	497	jns96_H04.f jns	SS	99	492	CB482726	unknown
H2-199	AJ704913	236	903820 MARC 4PIG 3'	SS	99	236	CK450726	unknown
H1-338	AJ704894	97	, Similar to RIKEN cDNA 2410141M05 gene	HS	91	92	BC008630	unknown
H2-216	AJ704917	107	RIKEN full-length enriched library, product: ribosomal protein S17	MM	94	93	AK007992	unknown
H2-288	AJ704920	162	CT02029A1F04 Equine Articular Cartilage	EC	87	114	CX601260	unknown
H1-14	AJ704868	221	endogenous retrovirus PERV-MSL	SS	97	221	AF038600
H1-302	AJ704892	108	None	SS
H2-95	AJ704906	137	None	SS
H2-206	AJ704916	658	None	SS

Bonnet et al. Reproductive Biology and Endocrinology 2006 4:35 doi:10.1186/1477-7827-4-35